5JJI: Rho transcription termination factor bound to rU7 and 6 ADP-BeF3 molecules

PDB ID: 5JJIDownload
MMDB ID: 144973
PDB Deposition Date: 2016/4/24
Updated in MMDB: 2016/12
Experimental Method:
x-ray diffraction
Resolution: 2.601  Å
Source Organism:
Escherichia coli O157:H7▼
Similar Structures:
Biological Unit for 5JJI: heptameric; determined by author and by software (PISA)
Molecular Components in 5JJI
Label Count Molecule
Proteins (6 molecules)
6
Transcription Termination Factor RHO
Molecule annotation
Nucleotide(1 molecule)
1
Ru12: 5'-r(p*up*up*up*up*up*up*up*up*up*up*up*u)- 3'
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
6
ADENOSINE-5'-DIPHOSPHATE (Link to PubChem not yet available)ADENOSINE-5'-DIPHOSPHATE
2
6
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
3
6
BERYLLIUM TRIFLUORIDE ION (Link to PubChem not yet available)BERYLLIUM TRIFLUORIDE ION
4
1
(4S)-2-METHYL-2,4-PENTANEDIOL (Link to PubChem not yet available)(4S)-2-METHYL-2,4-PENTANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303