5JF5: Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT020

PDB ID: 5JF5Download
MMDB ID: 145264
PDB Deposition Date: 2016/4/19
Updated in MMDB: 2016/12
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 5JF5: monomeric; determined by author and by software (PISA)
Molecular Components in 5JF5
Label Count Molecule
Protein (1 molecule)
1
Peptide Deformylase
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
1
(3R)-3-{3-[(2H-1,3-benzodioxol-5-yl)methyl]-1,2,4-oxadiazol-5-yl}-4-cyclopentyl-N-hydroxybutanamide(3R)-3-{3-[(2H-1,3-benzodioxol-5-yl)methyl]-1,2,4-oxadiazol-5-yl}-4-cyclopentyl-N-hydroxybutanamide
2
1
ACETATE IONACETATE ION
3
1
IMIDAZOLEIMIDAZOLE
4
9
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303