5JDH: Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 10 mM Na+ and 10mM Ca2+

PDB ID: 5JDHDownload
MMDB ID: 139209
PDB Deposition Date: 2016/4/16
Updated in MMDB: 2019/11
Experimental Method:
x-ray diffraction
Resolution: 2.203  Å
Source Organism:
Similar Structures:
Biological Unit for 5JDH: monomeric; determined by author and by software (PISA)
Molecular Components in 5JDH
Label Count Molecule
Protein (1 molecule)
1
Uncharacterized Membrane Protein Mj0091
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
1
CHLORIDE IONCHLORIDE ION
2
1
SODIUM IONSODIUM ION
3
2
CALCIUM IONCALCIUM ION
4
12
PENTADECANEPENTADECANE
5
3
PENTAETHYLENE GLYCOLPENTAETHYLENE GLYCOL
6
1
3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL
7
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
8
1
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303