5IVB: A High Resolution Structure of a Linked KDM5A Jmj Domain with Alpha-Ketoglutarate

PDB ID: 5IVBDownload
MMDB ID: 141370
PDB Deposition Date: 2016/3/20
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.389  Å
Source Organism:
Similar Structures:
Biological Unit for 5IVB: monomeric; determined by author
Molecular Components in 5IVB
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 5a,lysine-specific Demethylase 5A
(Gene symbol: KDM5A)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
4
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303