5IJS: Crystal structure of autotaxin with orthovanadate bound as a trigonal bipyramidal intermediate analog

PDB ID: 5IJSDownload
MMDB ID: 140121
PDB Deposition Date: 2016/3/2
Updated in MMDB: 2025/08
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5IJS: monomeric; determined by software (PISA)
Molecular Components in 5IJS
Label Count Molecule
Protein (1 molecule)
1
Ectonucleotide Pyrophosphatase/phosphodiesterase Family Member 2
(Gene symbol: Enpp2)
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
7alpha-hydroxycholesterol7alpha-hydroxycholesterol
3
2
ZINC IONZINC ION
4
1
CALCIUM IONCALCIUM ION
5
6
IODIDE IONIODIDE ION
6
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303