5IIY: SrpA adhesin in complex with the Neu5Ac-galactoside disaccharide

PDB ID: 5IIYDownload
MMDB ID: 147117
PDB Deposition Date: 2016/3/1
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.888  Å
Source Organism:
Similar Structures:
Biological Unit for 5IIY: dimeric; determined by author and by software (PISA)
Molecular Components in 5IIY
Label Count Molecule
Proteins (2 molecules)
2
Platelet-binding Glycoprotein
(Gene symbol: srpA)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
1
beta-D-galactopyranosebeta-D-galactopyranose
2
1
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
3
7
CALCIUM IONCALCIUM ION
4
3
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303