5GAN: The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom

PDB ID: 5GANDownload
MMDB ID: 136087
PDB Deposition Date: 2015/12/15
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.7  Å
Source Organism:
Similar Structures:
Biological Unit for 5GAN: 35-meric; determined by author and by software (PISA)
Molecular Components in 5GAN
Label Count Molecule
Proteins (32 molecules)
1
Pre-mrna-splicing Factor 8
(Gene symbol: PRP8)
Molecule annotation
1
U4/u6 Small Nuclear Ribonucleoprotein Prp4
(Gene symbol: PRP4)
Molecule annotation
1
Pre-mrna-splicing Factor 6
(Gene symbol: PRP6)
Molecule annotation
1
Spliceosomal Protein Dib1
(Gene symbol: DIB1)
Molecule annotation
1
Pre-mrna-processing Factor 31
(Gene symbol: PRP31)
Molecule annotation
1
U4/u6 Small Nuclear Ribonucleoprotein Prp3
(Gene symbol: PRP3)
Molecule annotation
1
Pre-mrna-splicing Helicase Brr2
(Gene symbol: BRR2)
Molecule annotation
1
Unknown Protein
Molecule annotation
2
Small Nuclear Ribonucleoprotein-associated Protein B
(Gene symbol: SMB1)
Molecule annotation
2
Small Nuclear Ribonucleoprotein SM D1
(Gene symbol: SMD1)
Molecule annotation
2
Small Nuclear Ribonucleoprotein SM D2
(Gene symbol: SMD2)
Molecule annotation
2
Small Nuclear Ribonucleoprotein SM D3
(Gene symbol: SMD3)
Molecule annotation
2
Small Nuclear Ribonucleoprotein E
(Gene symbol: SME1)
Molecule annotation
2
Small Nuclear Ribonucleoprotein F
(Gene symbol: SMX3)
Molecule annotation
2
Small Nuclear Ribonucleoprotein G
(Gene symbol: SMX2)
Molecule annotation
1
Snu66
Molecule annotation
1
13 KDA Ribonucleoprotein-associated Protein
(Gene symbol: SNU13)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm2
(Gene symbol: LSM2)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm3
(Gene symbol: LSM3)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm4
(Gene symbol: LSM4)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm5
(Gene symbol: LSM5)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm6
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm7
(Gene symbol: LSM7)
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm8
(Gene symbol: LSM8)
Molecule annotation
1
Pre-mrna-splicing Factor Snu114
(Gene symbol: SNU114)
Molecule annotation
Nucleotides(3 molecules)
1
U4 Snrna
Molecule annotation
1
U6 Snrna
Molecule annotation
1
U5 Snrna
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
GUANOSINE-5'-TRIPHOSPHATEGUANOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303