5FYH: Crystal structure of human JMJD2A in complex with fumarate

PDB ID: 5FYHDownload
MMDB ID: 137744
PDB Deposition Date: 2016/3/7
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.348  Å
Source Organism:
Similar Structures:
Biological Unit for 5FYH: monomeric; determined by author and by software (PISA)
Molecular Components in 5FYH
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 4A
(Gene symbol: KDM4A)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
ZINC IONZINC ION
2
1
FUMARIC ACIDFUMARIC ACID
3
1
SULFATE IONSULFATE ION
4
1
MANGANESE (II) IONMANGANESE (II) ION
5
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303