5FYC: Crystal structure of human JMJD2A in complex with succinate

PDB ID: 5FYCDownload
MMDB ID: 137532
PDB Deposition Date: 2016/3/7
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.261  Å
Source Organism:
Similar Structures:
Biological Unit for 5FYC: monomeric; determined by author and by software (PISA)
Molecular Components in 5FYC
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 4A
(Gene symbol: KDM4A)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
NICKEL (II) IONNICKEL (II) ION
2
1
ZINC IONZINC ION
3
1
FUMARIC ACIDFUMARIC ACID
4
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303