5FIC: Open form of murine Acid Sphingomyelinase in presence of lipid

PDB ID: 5FICDownload
MMDB ID: 140996
PDB Deposition Date: 2015/12/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 5FIC: monomeric; determined by author
Molecular Components in 5FIC
Label Count Molecule
Protein (1 molecule)
1
Sphingomyelin Phosphodiesterase
(Gene symbol: Smpd1)
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
11
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-L-fucopyranosealpha-L-fucopyranose
4
2
ZINC IONZINC ION
5
3
PHOSPHATE IONPHOSPHATE ION
6
2
CHLORIDE IONCHLORIDE ION
7
1
octadecylphosphonic acidoctadecylphosphonic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303