5FBJ: Complex structure of JMJD5 and substrate

PDB ID: 5FBJDownload
MMDB ID: 145573
PDB Deposition Date: 2015/12/14
Updated in MMDB: 2016/12
Experimental Method:
x-ray diffraction
Resolution: 2.42  Å
Source Organism:
Similar Structures:
Biological Unit for 5FBJ: monomeric; determined by author and by software (PISA)
Molecular Components in 5FBJ
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 8
(Gene symbol: KDM8)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
2
1
(2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid(2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid
3
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303