5F7N: Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A Lewis b pentasaccharide

PDB ID: 5F7NDownload
MMDB ID: 135814
PDB Deposition Date: 2015/12/8
Updated in MMDB: 2016/06
Experimental Method:
x-ray diffraction
Resolution: 2.28  Å
Source Organism:
Vicugna pacos▼
Similar Structures:
Biological Unit for 5F7N: dimeric; determined by software (PISA)
Molecular Components in 5F7N
Label Count Molecule
Proteins (2 molecules)
1
Adhesin Binding Fucosylated Histo-blood Group Antigen
Molecule annotation
1
Nanobody Nb-er19
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
alpha-L-fucopyranosealpha-L-fucopyranose
3
1
2-acetamido-2-deoxy-alpha-D-galactopyranose2-acetamido-2-deoxy-alpha-D-galactopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303