5F4R: HIV-1 gp120 complex with BNW-IV-147

PDB ID: 5F4RDownload
MMDB ID: 137924
PDB Deposition Date: 2015/12/3
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 5F4R: dimeric; determined by author and by software (PISA)
Molecular Components in 5F4R
Label Count Molecule
Proteins (2 molecules)
2
Envelope Glycoprotein Gp120 of Hiv-1 Clade C
Molecule annotation
Chemicals and Non-standard biopolymers (16 molecules)
1
2
FORMIC ACIDFORMIC ACID
2
12
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
2
~{N}'-[(1~{R},2~{R})-2-(carbamimidamidomethyl)-5-[[carbamimidoyl(methyl)amino]methyl]-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide~{N}'-[(1~{R},2~{R})-2-(carbamimidamidomethyl)-5-[[carbamimidoyl(methyl)amino]methyl]-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303