5F2F: Crystal structure of para-biphenyl-2-methyl-3', 5' di-methyl amide mannoside bound to FimH lectin domain

PDB ID: 5F2FDownload
MMDB ID: 138947
PDB Deposition Date: 2015/12/1
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.665  Å
Source Organism:
Similar Structures:
Biological Unit for 5F2F: monomeric; determined by author and by software (PISA)
Molecular Components in 5F2F
Label Count Molecule
Protein (1 molecule)
1
Protein Fimh
(Gene symbol: fimH)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
5-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3-methyl-phenyl]-~{N}1,~{N}3-dimethyl-benzene-1,3-dicarboxamide5-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3-methyl-phenyl]-~{N}1,~{N}3-dimethyl-benzene-1,3-dicarboxamide
2
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303