5EUH: Crystal structure of the c-di-GMP-bound GGDEF domain of P. fluorescens GcbC

PDB ID: 5EUHDownload
MMDB ID: 135212
PDB Deposition Date: 2015/11/18
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.989  Å
Source Organism:
Similar Structures:
Biological Unit for 5EUH: monomeric; determined by author and by software (PISA)
Molecular Components in 5EUH
Label Count Molecule
Protein (1 molecule)
1
Putative Ggdef Domain Membrane Protein
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
4
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
2
3
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303