5ERD: Crystal structure of human Desmoglein-2 ectodomain

PDB ID: 5ERDDownload
MMDB ID: 140234
PDB Deposition Date: 2015/11/13
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
Similar Structures:
Biological Unit for 5ERD: dimeric; determined by author and by software (PISA)
Molecular Components in 5ERD
Label Count Molecule
Proteins (2 molecules)
2
Desmoglein-2
(Gene symbol: DSG2)
Molecule annotation
Chemicals and Non-standard biopolymers (51 molecules)
1
17
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-L-fucopyranosealpha-L-fucopyranose
4
6
alpha-D-mannopyranosealpha-D-mannopyranose
5
22
CALCIUM IONCALCIUM ION
6
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303