5EQC: Structure of the ornithine aminotransferase from Toxoplasma gondii crystallized in presence of oxidized glutathione reveals partial occupancy of PLP at the protein active site

PDB ID: 5EQCDownload
MMDB ID: 136760
PDB Deposition Date: 2015/11/12
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5EQC: dimeric; determined by author and by software (PISA)
Molecular Components in 5EQC
Label Count Molecule
Proteins (2 molecules)
2
Ornithine Aminotransferase, Mitochondrial
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
1
alpha-D-glucopyranosealpha-D-glucopyranose
2
4
beta-D-glucopyranosebeta-D-glucopyranose
3
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
4
4
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
2
PYRIDOXAL-5'-PHOSPHATEPYRIDOXAL-5'-PHOSPHATE
6
1
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
7
1
BETA-MERCAPTOETHANOLBETA-MERCAPTOETHANOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303