5EQ3: Crystal structure of the SrpA adhesin from Streptococcus sanguinis with a sialyl galactose disaccharide bound

PDB ID: 5EQ3Download
MMDB ID: 136051
PDB Deposition Date: 2015/11/12
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 5EQ3: dimeric; determined by author and by software (PISA)
Molecular Components in 5EQ3
Label Count Molecule
Proteins (2 molecules)
2
Platelet-binding Glycoprotein
(Gene symbol: srpA)
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
1
methyl beta-D-galactopyranosidemethyl beta-D-galactopyranoside
2
1
N-glycolyl-alpha-neuraminic acidN-glycolyl-alpha-neuraminic acid
3
7
CALCIUM IONCALCIUM ION
4
3
ACETATE IONACETATE ION
5
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303