5EEI: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with SAHA

PDB ID: 5EEIDownload
MMDB ID: 141293
PDB Deposition Date: 2015/10/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.32  Å
Source Organism:
Similar Structures:
Biological Unit for 5EEI: monomeric; determined by author
Molecular Components in 5EEI
Label Count Molecule
Protein (1 molecule)
1
Hdac6 Protein
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
1
ZINC IONZINC ION
2
2
POTASSIUM IONPOTASSIUM ION
3
1
OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDEOCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
4
2
GLYCEROLGLYCEROL
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
3
CHLORIDE IONCHLORIDE ION
7
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303