5EEF: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 in complex with trichostatin A

PDB ID: 5EEFDownload
MMDB ID: 141292
PDB Deposition Date: 2015/10/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.151  Å
Source Organism:
Similar Structures:
Biological Unit for 5EEF: monomeric; determined by author
Molecular Components in 5EEF
Label Count Molecule
Protein (1 molecule)
1
Hdac6
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
ZINC IONZINC ION
2
1
TRICHOSTATIN ATRICHOSTATIN A
3
2
AMMONIUM IONAMMONIUM ION
4
1
SULFATE IONSULFATE ION
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303