5EAQ: Two active site divalent ion in the crystal structure of the hammerhead ribozyme bound to a transition state analog-Mn2+

PDB ID: 5EAQDownload
MMDB ID: 136746
PDB Deposition Date: 2015/10/16
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 3.201  Å
Source Organism:
Biological Unit for 5EAQ: dimeric; determined by author and by software (PISA)
Molecular Components in 5EAQ
Label Count Molecule
Nucleotides(2 molecules)
1
RNA (48-mer)
Molecule annotation
1
RNA (5'-r(*gp*gp*gp*cp*gp*u*(cvc)*up*gp*gp*gp*cp*ap*gp*up*ap*cp*cp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
6
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303