5E98: Crystal structure of human heparanase in complex with HepMer M04S02a

PDB ID: 5E98Download
MMDB ID: 190243
PDB Deposition Date: 2015/10/14
Updated in MMDB: 2020/07
Experimental Method:
x-ray diffraction
Resolution: 1.63  Å
Source Organism:
Similar Structures:
Biological Unit for 5E98: dimeric; determined by author and by software (PISA)
Molecular Components in 5E98
Label Count Molecule
Proteins (2 molecules)
1
Heparanase
(Gene symbol: HPSE)
Molecule annotation
1
Heparanase
(Gene symbol: HPSE)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
2
beta-D-glucopyranuronic acidbeta-D-glucopyranuronic acid
2
1
2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose
3
1
IMIDAZOLEIMIDAZOLE
4
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
5
1
CHLORIDE IONCHLORIDE ION
6
1
P-NITROPHENOLP-NITROPHENOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303