5E5O: I-SmaMI bound to uncleaved DNA target in the presence of Calcium ions

PDB ID: 5E5ODownload
MMDB ID: 135500
PDB Deposition Date: 2015/10/8
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.36  Å
Source Organism:
Sordaria macrospora k-hell▼
Similar Structures:
Biological Unit for 5E5O: trimeric; determined by author and by software (PISA)
Molecular Components in 5E5O
Label Count Molecule
Protein (1 molecule)
1
I-smami Laglidadg Endonuclease
Molecule annotation
Nucleotides(2 molecules)
1
DNA (25-mer)
Molecule annotation
1
TOP Strand DNA (25-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
3
CALCIUM IONCALCIUM ION
2
7
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303