5DW6: Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to acetate and the CoA analogue 3'-phosphoadenosine 5'-(O-(N-propyl-R-pantothenamide))pyrophosphate (MX)

PDB ID: 5DW6Download
MMDB ID: 138868
PDB Deposition Date: 2015/9/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.548  Å
Source Organism:
Similar Structures:
Biological Unit for 5DW6: dimeric; determined by author and by software (PISA)
Molecular Components in 5DW6
Label Count Molecule
Proteins (2 molecules)
2
Succinyl-coa:acetate Coa-transferase
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
6
ACETATE IONACETATE ION
2
2
[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3R)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-(propylamino)propyl]amino]butyl] hydrogen phosphate[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3R)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-(propylamino)propyl]amino]butyl] hydrogen phosphate
3
3
IMIDAZOLEIMIDAZOLE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303