5DED: Crystal structure of the small alarmone synthethase 1 from Bacillus subtilis bound to its product pppGpp

PDB ID: 5DEDDownload
MMDB ID: 133761
PDB Deposition Date: 2015/8/25
Updated in MMDB: 2015/11
Experimental Method:
x-ray diffraction
Resolution: 2.942  Å
Source Organism:
Similar Structures:
Biological Unit for 5DED: tetrameric; determined by software (PISA)
Molecular Components in 5DED
Label Count Molecule
Proteins (4 molecules)
4
GTP Pyrophosphokinase Yjbm
(Gene symbol: relP)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
6
guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
2
2
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303