5DB8: Structure of human DNA polymerase beta Host-Guest complex with the N7MG base paired with a dA

PDB ID: 5DB8Download
MMDB ID: 134128
PDB Deposition Date: 2015/8/21
Updated in MMDB: 2015/11
Experimental Method:
x-ray diffraction
Resolution: 2.547  Å
Source Organism:
Similar Structures:
Biological Unit for 5DB8: tetrameric; determined by author and by software (PISA)
Molecular Components in 5DB8
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Beta
(Gene symbol: POLB)
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(*cp*cp*gp*ap*cp*gp*tp*cp*gp*cp*ap*tp*ap*ap*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*tp*(fmg)p*ap*tp*gp*cp*gp*a)-3')
Molecule annotation
1
DNA (5'-d(p*gp*tp*cp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303