5D5M: Structure of human MR1-5-OP-RU in complex with human MAIT M33.64 TCR

PDB ID: 5D5MDownload
MMDB ID: 136021
PDB Deposition Date: 2015/8/11
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5D5M: dimeric; determined by author and by software (PISA)
Molecular Components in 5D5M
Label Count Molecule
Proteins (2 molecules)
1
Major Histocompatibility Complex Class I-related Gene Protein
(Gene symbol: MR1)
Molecule annotation
1
Beta-2-microglobulin
(Gene symbol: B2M)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol
2
1
GLYCEROLGLYCEROL
3
1
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303