5CQ0: Crystal structure of murine polyomavirus RA strain VP1 in complex with the GD1a glycan

PDB ID: 5CQ0Download
MMDB ID: 133742
PDB Deposition Date: 2015/7/21
Updated in MMDB: 2015/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 5CQ0: pentameric; determined by author and by software (PISA)
Molecular Components in 5CQ0
Label Count Molecule
Proteins (5 molecules)
5
Capsid Protein VP1
Molecule annotation
Chemicals and Non-standard biopolymers (55 molecules)
1
10
beta-D-galactopyranosebeta-D-galactopyranose
2
5
2-acetamido-2-deoxy-beta-D-galactopyranose2-acetamido-2-deoxy-beta-D-galactopyranose
3
5
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
4
14
SULFATE IONSULFATE ION
5
21
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303