5CG9: NgTET1 in complex with 5mC DNA in space group P3221

PDB ID: 5CG9Download
MMDB ID: 132490
PDB Deposition Date: 2015/7/9
Updated in MMDB: 2015/12
Experimental Method:
x-ray diffraction
Resolution: 2.693  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5CG9: trimeric; determined by author
Molecular Components in 5CG9
Label Count Molecule
Protein (1 molecule)
1
Tet-like Dioxygenase
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*cp*ap*tp*gp*cp*gp*cp*tp*gp*ap*c)-3')
Molecule annotation
1
DNA (5'-d(*tp*gp*tp*cp*ap*gp*(5cm)p*gp*cp*ap*tp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
SULFATE IONSULFATE ION
2
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
3
1
MANGANESE (II) IONMANGANESE (II) ION
4
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303