5CD5: Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core

PDB ID: 5CD5Download
MMDB ID: 138079
PDB Deposition Date: 2015/7/3
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 3.396  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 5CD5: trimeric; determined by software (PISA)
Molecular Components in 5CD5
Label Count Molecule
Proteins (3 molecules)
1
93th057 Hiv-1 Gp120 Core
Molecule annotation
1
Drvia7 FAB Heavy Chain
Molecule annotation
1
Drvia7 FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
14
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303