5C47: Crystal structure of ABBB + UDP-C-Gal (long soak) + DI

PDB ID: 5C47Download
MMDB ID: 132935
PDB Deposition Date: 2015/6/17
Updated in MMDB: 2015/11
Experimental Method:
x-ray diffraction
Resolution: 1.39  Å
Source Organism:
Similar Structures:
Biological Unit for 5C47: dimeric; determined by author and by software (PISA)
Molecular Components in 5C47
Label Count Molecule
Proteins (2 molecules)
2
Histo-blood Group ABO System Transferase
(Gene symbol: ABO)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
MANGANESE (II) IONMANGANESE (II) ION
2
2
octyl 3-deoxy-2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-xylo-hexopyranosideoctyl 3-deoxy-2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-xylo-hexopyranoside
3
2
2-(2-METHOXYETHOXY)ETHANOL2-(2-METHOXYETHOXY)ETHANOL
4
2
(((2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)methyl)phosphonic (((2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl phosphoric) anhydride(((2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)methyl)phosphonic (((2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl phosphoric) anhydride
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303