5BYR: Semisynthetic [FeFe]-hydrogenase CpI with propane-dithiolato-bridged [2Fe] cofactor

PDB ID: 5BYRDownload
MMDB ID: 134098
PDB Deposition Date: 2015/6/10
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 1.82  Å
Source Organism:
Similar Structures:
Biological Unit for 5BYR: monomeric; determined by author
Molecular Components in 5BYR
Label Count Molecule
Protein (1 molecule)
1
Iron Hydrogenase 1
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
4
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
3
1
bis(cyanido-kappaC)(dicarbonyl)-mu-(oxomethylidene)[mu-propane-1,3-bis(thiolate)-1kappa~2~S~1~,S~3~:2kappa~2~S~1~,S~3~] diiron(2+)bis(cyanido-kappaC)(dicarbonyl)-mu-(oxomethylidene)[mu-propane-1,3-bis(thiolate)-1kappa~2~S~1~,S~3~:2kappa~2~S~1~,S~3~] diiron(2+)
4
3
MAGNESIUM IONMAGNESIUM ION
5
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303