5BYL: Aminoglycoside Phosphotransferase (2'')-Ia (CTD of AAC(6')-Ie/APH(2'')-Ia) in complex with GMPPCP and Magnesium

PDB ID: 5BYLDownload
MMDB ID: 139476
PDB Deposition Date: 2015/6/10
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 5BYL: monomeric; determined by author and by software (PISA)
Molecular Components in 5BYL
Label Count Molecule
Protein (1 molecule)
1
Bifunctional Aac/aph
(Gene symbol: aacA-aphD)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER (Link to PubChem not yet available)PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
2
2
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
3
1
CHLORIDE ION (Link to PubChem not yet available)CHLORIDE ION
4
2
GLYCEROL (Link to PubChem not yet available)GLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303