5BPA: X-RAY Co-structure of MMP-13 with 4-[({5-[2-(ethoxycarbonyl)-1H-indol-5-yl]-1-methyl-1H-pyrazol-3-yl}formamido)methyl]benzoate

PDB ID: 5BPADownload
MMDB ID: 130219
PDB Deposition Date: 2015/5/27
Updated in MMDB: 2016/07
Experimental Method:
x-ray diffraction
Resolution: 1.79  Å
Source Organism:
Similar Structures:
Biological Unit for 5BPA: dimeric; determined by author and by software (PISA)
Molecular Components in 5BPA
Label Count Molecule
Proteins (2 molecules)
2
Collagenase 3
(Gene symbol: MMP13)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
4
ZINC IONZINC ION
2
6
CALCIUM IONCALCIUM ION
3
2
4-{[({5-[2-(ethoxycarbonyl)-1H-indol-5-yl]-1-methyl-1H-pyrazol-3-yl}carbonyl)amino]methyl}benzoic acid4-{[({5-[2-(ethoxycarbonyl)-1H-indol-5-yl]-1-methyl-1H-pyrazol-3-yl}carbonyl)amino]methyl}benzoic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303