5BJP: Crystal structure of the Corn RNA aptamer in complex with DFHO, iridium hexammine soak

PDB ID: 5BJPDownload
MMDB ID: 154716
PDB Deposition Date: 2016/8/21
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.51  Å
Source Organism:
Biological Unit for 5BJP: dimeric; determined by author and by software (PISA)
Molecular Components in 5BJP
Label Count Molecule
Nucleotides(2 molecules)
2
RNA (36-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
2
IRIDIUM IONIRIDIUM ION
2
4
POTASSIUM IONPOTASSIUM ION
3
2
MAGNESIUM IONMAGNESIUM ION
4
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
5
1
(5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one(5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303