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5B8F:
X-ray Crystal Structure of a 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Pseudomonas aeruginosa
PDB ID:
5B8F
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MMDB ID:
129183
PDB Deposition Date:
2015/4/20
Updated in MMDB:
2019/12
Experimental Method:
x-ray diffraction
Resolution:
1.45 Å
Source Organism:
Pseudomonas aeruginosa PAO1
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5B8F: trimeric; determined by software (PISA)
Molecular Components in 5B8F
Label
Count
Molecule
Proteins (3 molecules)
A
B
C
3
2-c-methyl-d-erythritol 2,4-cyclodiphosphate Synthase
(Gene symbol:
ygbB
)
Chemicals and Non-standard biopolymers (11 molecules)
1
3
MAGNESIUM ION
2
3
CYTIDINE-5'-MONOPHOSPHATE
3
1
(4S)-2-METHYL-2,4-PENTANEDIOL
4
4
PHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303