5B5B: Crystal structure of VDR-LBD complexed with 2-methylidene-26,27-diphenyl-19-nor-1,25-dihydroxyvitamin D3

PDB ID: 5B5BDownload
MMDB ID: 140446
PDB Deposition Date: 2016/5/2
Updated in MMDB: 2016/08
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Rattus norvegicus▼
Similar Structures:
Biological Unit for 5B5B: dimeric; determined by author and by software (PISA)
Molecular Components in 5B5B
Label Count Molecule
Proteins (2 molecules)
1
Vitamin D3 Receptor
Molecule annotation
1
Mediator of RNA Polymerase II Transcription Subunit 1
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-oxidanyl-7-phenyl-6-(phenylmethyl)heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-oxidanyl-7-phenyl-6-(phenylmethyl)heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303