5B35: Serial Femtosecond Crystallography (SFX) of Ground State Bacteriorhodopsin Crystallized from Bicelles Determined Using 7-keV X-ray Free Electron Laser (XFEL) at SACLA

PDB ID: 5B35Download
MMDB ID: 144637
PDB Deposition Date: 2016/2/10
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2.35  Å
Source Organism:
Similar Structures:
Biological Unit for 5B35: monomeric; determined by author
Molecular Components in 5B35
Label Count Molecule
Protein (1 molecule)
1
Bacteriorhodopsin
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
1
RETINALRETINAL
2
1
(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol(3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol
3
1
N-OCTANEN-OCTANE
4
5
DECANEDECANE
5
3
DODECANEDODECANE
6
2
HEXADECANEHEXADECANE
7
2
HEPTANEHEPTANE
8
2
nonanenonane
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303