5A7P: Crystal structure of human JMJD2A in complex with compound 36

PDB ID: 5A7PDownload
MMDB ID: 135392
PDB Deposition Date: 2015/7/9
Updated in MMDB: 2016/03
Experimental Method:
x-ray diffraction
Resolution: 2.28  Å
Source Organism:
Similar Structures:
Biological Unit for 5A7P: monomeric; determined by author and by software (PISA)
Molecular Components in 5A7P
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 4A
(Gene symbol: KDM4A)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
SULFATE IONSULFATE ION
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
1
ZINC IONZINC ION
4
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
1
2-[5-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]-2-oxidanyl-phenyl]pyridine-4-carboxylic acid2-[5-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]-2-oxidanyl-phenyl]pyridine-4-carboxylic acid
6
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303