5A1F: Crystal structure of the catalytic domain of PLU1 in complex with N-oxalylglycine

PDB ID: 5A1FDownload
MMDB ID: 129167
PDB Deposition Date: 2015/4/29
Updated in MMDB: 2016/07
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Similar Structures:
Biological Unit for 5A1F: monomeric; determined by software (PISA)
Molecular Components in 5A1F
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 5B, Lysine-specific Demethylase 5B
(Gene symbol: KDM5B)
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
ZINC IONZINC ION
2
1
N-OXALYLGLYCINEN-OXALYLGLYCINE
3
2
MANGANESE (II) IONMANGANESE (II) ION
4
1
PHOSPHATE IONPHOSPHATE ION
5
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
6
7
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303