4ZYB: High resolution structure of M23 peptidase LytM with substrate analogue

PDB ID: 4ZYBDownload
MMDB ID: 133518
PDB Deposition Date: 2015/5/21
Updated in MMDB: 2015/10
Experimental Method:
x-ray diffraction
Resolution: 1.5  Å
Source Organism:
Similar Structures:
Biological Unit for 4ZYB: monomeric; determined by author
Molecular Components in 4ZYB
Label Count Molecule
Protein (1 molecule)
1
Glycyl-glycine Endopeptidase Lytm
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
ZINC IONZINC ION
2
1
CALCIUM IONCALCIUM ION
3
2
CHLORIDE IONCHLORIDE ION
4
1
UNKNOWN LIGANDUNKNOWN LIGAND
5
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
tetraglycine phosphinatetetraglycine phosphinate
7
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303