4YTG: Crystal structure of Porphyromonas gingivalis peptidylarginine deiminase (PPAD) mutant C351A in complex with dipeptide Met-Arg

PDB ID: 4YTGDownload
MMDB ID: 130558
PDB Deposition Date: 2015/3/17
Updated in MMDB: 2018/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 4YTG: monomeric; determined by software (PISA)
Molecular Components in 4YTG
Label Count Molecule
Protein (1 molecule)
1
Peptidylarginine Deiminase
(Gene symbol: PGN_RS04285)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
1
SODIUM IONSODIUM ION
2
1
CYSTEINECYSTEINE
3
1
METHIONINEMETHIONINE
4
1
ARGININEARGININE
5
5
GLYCEROLGLYCEROL
6
1
CHLORIDE IONCHLORIDE ION
7
2
AZIDE IONAZIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303