4YMM: Structure of human DNA polymerase beta complexed with 7BG as the template base in a 1-nucleotide gapped DNA

PDB ID: 4YMMDownload
MMDB ID: 137188
PDB Deposition Date: 2015/3/6
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.199  Å
Source Organism:
Similar Structures:
Biological Unit for 4YMM: tetrameric; determined by software (PISA)
Molecular Components in 4YMM
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Beta
(Gene symbol: POLB)
Molecule annotation
Nucleotides(3 molecules)
1
DNA 16-mer (Template)
Molecule annotation
1
DNA 10-mer (Up-primer)
Molecule annotation
1
DNA 5-mer (Dn-primer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303