4YCM: Crystal structure of the calcium pump with bound marine macrolide BLS

PDB ID: 4YCMDownload
MMDB ID: 135360
PDB Deposition Date: 2015/2/20
Updated in MMDB: 2025/04
Experimental Method:
x-ray diffraction
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 4YCM: monomeric; determined by author and by software (PISA)
Molecular Components in 4YCM
Label Count Molecule
Protein (1 molecule)
1
Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1
(Gene symbol: ATP2A1)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
SODIUM IONSODIUM ION
2
2
SULFATE IONSULFATE ION
3
1
(4S,5E,8S,9E,11S,13E,15E,18R)-8-methoxy-9,11-dimethyl-18-[(1Z,4E)-2-methylhexa-1,4-dien-1-yl]-2-oxooxacyclooctadeca-5,9,13,15-tetraen-4-yl 3-O-methyl-beta-D-glucopyranoside(4S,5E,8S,9E,11S,13E,15E,18R)-8-methoxy-9,11-dimethyl-18-[(1Z,4E)-2-methylhexa-1,4-dien-1-yl]-2-oxooxacyclooctadeca-5,9,13,15-tetraen-4-yl 3-O-methyl-beta-D-glucopyranoside
4
2
PHOSPHATIDYLETHANOLAMINEPHOSPHATIDYLETHANOLAMINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303