4YB1: 20a Mutant C-di-gmp Vc2 Riboswitch Bound With 3',3'-cgamp

PDB ID: 4YB1Download
MMDB ID: 128671
PDB Deposition Date: 2015/2/18
Updated in MMDB: 2015/07
Experimental Method:
x-ray diffraction
Resolution: 2.08  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 4YB1: dimeric; determined by author and by software (PISA)
Molecular Components in 4YB1
Label Count Molecule
Protein (1 molecule)
1
U1 Small Nuclear Ribonucleoprotein a
Molecule annotation
Nucleotide(1 molecule)
1
RNA (91-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
Magnesium IonMagnesium Ion
2
1
2-Amino-9-[(2r,3r,3as,5r,7ar,9r,10r,10as,12r,14ar)-9-(6-Amino-9h-Purin-9-Yl)-3,5,10,12-Tetrahydroxy-5,12-Dioxidooctahydro-2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-Yl]-1,9-Dihydro-6h-Purin-6-One2-Amino-9-[(2r,3r,3as,5r,7ar,9r,10r,10as,12r,14ar)-9-(6-Amino-9h-Purin-9-Yl)-3,5,10,12-Tetrahydroxy-5,12-Dioxidooctahydro-2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-Yl]-1,9-Dihydro-6h-Purin-6-One
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303