4Y3D: Endothiapepsin in complex with fragment 321

PDB ID: 4Y3DDownload
MMDB ID: 136516
PDB Deposition Date: 2015/2/10
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.482  Å
Source Organism:
Similar Structures:
Biological Unit for 4Y3D: monomeric; determined by software (PISA)
Molecular Components in 4Y3D
Label Count Molecule
Protein (1 molecule)
1
Endothiapepsin
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
N-(1,3-benzodioxol-5-ylmethyl)cyclopentanamineN-(1,3-benzodioxol-5-ylmethyl)cyclopentanamine
2
2
ACETATE IONACETATE ION
3
2
GLYCEROLGLYCEROL
4
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303