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4XD1:
X-ray Structure Of The N-formyltransferase Qdtf From Providencia Alcalifaciens, W305a Mutant, In The Presence Of Tdp-qui3n And N5-thf
PDB ID:
4XD1
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MMDB ID:
126366
PDB Deposition Date:
2014/12/18
Updated in MMDB:
2015/02
Experimental Method:
x-ray diffraction
Resolution:
1.5 Å
Source Organism:
Providencia alcalifaciens
Similar Structures:
VAST+
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Biological Unit for 4XD1: monomeric; determined by author
Molecular Components in 4XD1
Label
Count
Molecule
Protein (1 molecule)
A
1
Tdp-3-aminoquinovose-n-formyltransferase
Chemicals and Non-standard biopolymers (14 molecules)
1
1
N-{[4-({[(6r)-2-Amino-5-Formyl-4-Oxo-1,4,5,6,7,8-Hexahydropteridin-6-Yl]methyl}amino)phenyl]carbonyl}-L-Glutamic Acid
2
1
[(3r,4s,5s,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2-Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-Methyl-2,4-Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl]hydrogen Phosphate
3
4
Sodium Ion
4
5
1,2-Ethanediol
5
3
Chloride Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303