4X13: JC Polyomavirus genotype 3 VP1 in complex with LSTc pentasaccharide

PDB ID: 4X13Download
MMDB ID: 128759
PDB Deposition Date: 2014/11/24
Updated in MMDB: 2015/05
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 4X13: pentameric; determined by author and by software (PISA)
Molecular Components in 4X13
Label Count Molecule
Proteins (5 molecules)
5
Major Capsid Protein
Molecule annotation
Chemicals and Non-standard biopolymers (45 molecules)
1
2
beta-D-glucopyranosebeta-D-glucopyranose
2
6
beta-D-galactopyranosebeta-D-galactopyranose
3
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
3
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
5
11
GLYCEROLGLYCEROL
6
15
1,2-ETHANEDIOL1,2-ETHANEDIOL
7
5
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303