4UPV: Low X-ray dose structure of a Ni-A Ni-Sox mixture of the D. fructosovorans NiFe-hydrogenase L122A mutant

PDB ID: 4UPVDownload
MMDB ID: 227892
PDB Deposition Date: 2014/6/18
Updated in MMDB: 2023/03
Experimental Method:
x-ray diffraction
Resolution: 1.52  Å
Source Organism:
Similar Structures:
Biological Unit for 4UPV: dimeric; determined by software (PISA)
Molecular Components in 4UPV
Label Count Molecule
Proteins (2 molecules)
1
Nife-hydrogenase Small Subunit
Molecule annotation
1
Nife-hydrogenase Large Subunit
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
2
GLYCINEGLYCINE
2
2
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
3
1
FE3-S4 CLUSTERFE3-S4 CLUSTER
4
1
morpholine-4-sulfonic acidmorpholine-4-sulfonic acid
5
10
GLYCEROLGLYCEROL
6
1
HYDROSULFURIC ACIDHYDROSULFURIC ACID
7
1
CARBONMONOXIDE-(DICYANO) IRONCARBONMONOXIDE-(DICYANO) IRON
8
1
NICKEL (II) IONNICKEL (II) ION
9
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303