4UDW: Thrombin in complex with 1-(2R)-2-amino-3-phenyl-propanoyl-N-(2, 5dichlorophenyl)methylpyrrolidine-2-carboxamide

PDB ID: 4UDWDownload
MMDB ID: 132014
PDB Deposition Date: 2014/12/12
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.16  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 4UDW: trimeric; determined by author and by software (PISA)
Molecular Components in 4UDW
Label Count Molecule
Proteins (3 molecules)
1
Thrombin Heavy Chain
Molecule annotation
1
Hirudin Variant-2
Molecule annotation
1
Thrombin Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
SODIUM IONSODIUM ION
2
1
D-phenylalanyl-N-(2,5-dichlorobenzyl)-L-prolinamideD-phenylalanyl-N-(2,5-dichlorobenzyl)-L-prolinamide
3
1
PHOSPHATE IONPHOSPHATE ION
4
1
GLYCEROLGLYCEROL
5
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303